monkeybread.plot.ligand_receptor_score_barplot_per_niche

monkeybread.plot.ligand_receptor_score_barplot_per_niche(niche_to_lr_to_score, lr_pair, plot_niches=None, ax=None, title=None, show=True, **barplot_kwargs)

Create a barplot showing the ligand/receptor score for a specific ligand/receptor pair within each niche. This function plots the data returned by monkeybread.calc.ligand_receptor_score_per_niche().

Parameters:

• niche_to_lr_to_score (Dict[str, Dict[Tuple[str, str], float]]) – A dictionary mapping each niche to a sub-dictionary mapping each ligand/receptor (represented as a tuple) to its score in that niche. This data structure is returned by monkeybread.calc.ligand_receptor_score_per_niche()

• lr_pair (List[Tuple[str, str]]) – Specific ligand/receptor pair to plot

• plot_niches (Optional[List[str]] (default: None)) – Specific niches to plot. If None, all niches will be plotted

• ax (Optional[Axes] (default: None)) – Axes object to plot

• title (Optional[str] (default: None)) – Title of figure

• show (Optional[bool] (default: True)) – If True, show the plot. If False return the Axes object the plot is contained within

• barplot_kwargs – Arguments passed to seaborn.barplot()

Return type:

Optional[Axes]

Returns:

: If show = True, returns nothing. Otherwise, returns the Axes object the plot is contained within.

Example